Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC079804.1-201ENST00000461922 436 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AL591473.1-201ENST00000464297 313 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 GAPDHP36-201ENST00000480688 918 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AC104997.1-201ENST00000519761 717 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AC120057.2-201ENST00000571520 271 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AC110743.1-201ENST00000584870 478 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 AC067931.1-201ENST00000624190 671 ntBASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHROOM1Q2M3G4 NOL8P1-201ENST00000508336 3529 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AL139811.1-201ENST00000424779 2299 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC009965.2-201ENST00000425328 970 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 OR5BE1P-201ENST00000425977 939 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 RPL23AP46-201ENST00000438548 490 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC108471.1-201ENST00000513977 287 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 SNORA70.17-201ENST00000516449 133 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 MIR5684-201ENST00000585074 65 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 BMS1P7-201ENST00000602440 1052 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC064801.1-201ENST00000612025 407 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AL121772.2-201ENST00000614331 297 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC079298.2-201ENST00000623885 459 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AC012442.3-202ENST00000636742 206 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 OR5BE1P-202ENST00000641168 1176 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 AL136964.1-201ENST00000622038 2990 ntBASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SHROOM1Q2M3G4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC087565.3-202ENST00000642085 1603 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 RNA5SP22-201ENST00000365393 109 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AL139039.2-201ENST00000407436 479 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 MTND3P20-201ENST00000407663 186 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 BTF3P9-201ENST00000418784 283 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 ARL4AP4-201ENST00000434170 518 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC092691.2-201ENST00000461787 803 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 RN7SL817P-201ENST00000480777 288 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 BNIP3P41-201ENST00000503774 571 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC115621.1-201ENST00000604653 858 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC123768.4-201ENST00000616244 701 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 AC017002.4-201ENST00000604721 1525 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.8□□□□□ -1.64
SHROOM1Q2M3G4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 SNORA73.2-201ENST00000364946 201 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 RN7SKP222-201ENST00000410651 315 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 TCEA1P4-201ENST00000415066 844 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 RPL7P31-201ENST00000450192 724 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 AC104629.2-201ENST00000468627 598 ntBASIC4.79□□□□□ -1.64
SHROOM1Q2M3G4 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms