Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDC1P18827 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDC1P18827 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.96□□□□□ -1.78
SDC1P18827 RNA5SP447-201ENST00000363749 119 ntBASIC3.96□□□□□ -1.78
SDC1P18827 SNORA62.2-201ENST00000364672 152 ntBASIC3.96□□□□□ -1.78
SDC1P18827 RNU6-1005P-201ENST00000384519 107 ntBASIC3.96□□□□□ -1.78
SDC1P18827 MIR192-201ENST00000384915 110 ntBASIC3.96□□□□□ -1.78
SDC1P18827 RNU6-796P-201ENST00000391086 107 ntBASIC3.96□□□□□ -1.78
SDC1P18827 RPL23AP48-201ENST00000406913 488 ntBASIC3.96□□□□□ -1.78
SDC1P18827 ELOCP19-201ENST00000411919 318 ntBASIC3.96□□□□□ -1.78
SDC1P18827 PGBD4P8-201ENST00000412993 562 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.96□□□□□ -1.78
SDC1P18827 JKAMPP1-201ENST00000413804 919 ntBASIC3.96□□□□□ -1.78
SDC1P18827 TATDN1P1-201ENST00000414123 891 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.96□□□□□ -1.78
SDC1P18827 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.96□□□□□ -1.78
SDC1P18827 EIF2S2P3-201ENST00000428356 999 ntBASIC3.96□□□□□ -1.78
SDC1P18827 FO393419.3-201ENST00000428741 282 ntBASIC3.96□□□□□ -1.78
SDC1P18827 NANOGP6-201ENST00000429190 847 ntBASIC3.96□□□□□ -1.78
SDC1P18827 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.96□□□□□ -1.78
SDC1P18827 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.96□□□□□ -1.78
SDC1P18827 RPL36AP13-201ENST00000457490 317 ntBASIC3.96□□□□□ -1.78
SDC1P18827 CCDC75P1-201ENST00000469247 791 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.96□□□□□ -1.78
SDC1P18827 AF213884.1-201ENST00000488102 463 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.96□□□□□ -1.78
SDC1P18827 AC139783.2-201ENST00000504847 1145 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC093824.1-201ENST00000508796 343 ntBASIC3.96□□□□□ -1.78
SDC1P18827 VWA8P1-201ENST00000510889 176 ntBASIC3.96□□□□□ -1.78
SDC1P18827 NPM1P6-201ENST00000521088 871 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC090281.1-201ENST00000523019 276 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC105233.3-201ENST00000531125 744 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.96□□□□□ -1.78
SDC1P18827 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SDC1P18827 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.96□□□□□ -1.78
SDC1P18827 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.96□□□□□ -1.78
SDC1P18827 AC022655.2-201ENST00000577280 318 ntBASIC3.96□□□□□ -1.78
SDC1P18827 OR1AB1P-201ENST00000585564 761 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.96□□□□□ -1.78
SDC1P18827 AC123786.2-201ENST00000603459 275 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC005191.1-201ENST00000603950 358 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC005972.3-201ENST00000606304 481 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.96□□□□□ -1.78
SDC1P18827 AL163051.2-201ENST00000618976 735 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AC024023.1-201ENST00000624530 922 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AL356121.2-201ENST00000624715 780 ntBASIC3.96□□□□□ -1.78
SDC1P18827 AP005264.7-201ENST00000625003 745 ntBASIC3.96□□□□□ -1.78
SDC1P18827 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
SDC1P18827 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.96□□□□□ -1.78
SDC1P18827 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDC1P18827 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
SDC1P18827 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.96□□□□□ -1.78
SDC1P18827 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
SDC1P18827 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SDC1P18827 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.96□□□□□ -1.78
SDC1P18827 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SDC1P18827 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDC1P18827 GTF2H2B-203ENST00000508065 1432 ntBASIC3.95□□□□□ -1.78
SDC1P18827 ASNSP1-201ENST00000518311 1939 ntBASIC3.95□□□□□ -1.78
SDC1P18827 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SDC1P18827 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SDC1P18827 ERCC6-202ENST00000374127 1782 ntBASIC3.95□□□□□ -1.78
SDC1P18827 AC012618.3-205ENST00000637896 1496 ntBASIC3.95□□□□□ -1.78
SDC1P18827 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SDC1P18827 AC103591.2-201ENST00000265259 766 ntBASIC3.95□□□□□ -1.78
SDC1P18827 RNU1-132P-201ENST00000364300 164 ntBASIC3.95□□□□□ -1.78
SDC1P18827 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SDC1P18827 MIR92A2-201ENST00000385299 75 ntBASIC3.95□□□□□ -1.78
SDC1P18827 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SDC1P18827 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SDC1P18827 SNORA3C-201ENST00000408792 125 ntBASIC3.95□□□□□ -1.78
SDC1P18827 RNA5SP39-201ENST00000411245 120 ntBASIC3.95□□□□□ -1.78
SDC1P18827 AL158825.1-201ENST00000414735 521 ntBASIC3.95□□□□□ -1.78
SDC1P18827 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.95□□□□□ -1.78
SDC1P18827 LINC01881-201ENST00000416103 412 ntBASIC3.95□□□□□ -1.78
SDC1P18827 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.95□□□□□ -1.78
SDC1P18827 RPS27AP7-201ENST00000422792 455 ntBASIC3.95□□□□□ -1.78
SDC1P18827 CNOT7P1-201ENST00000429006 852 ntBASIC3.95□□□□□ -1.78
SDC1P18827 AL512661.1-201ENST00000434586 1253 ntBASIC3.95□□□□□ -1.78
SDC1P18827 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.95□□□□□ -1.78
SDC1P18827 RPL23AP46-201ENST00000438548 490 ntBASIC3.95□□□□□ -1.78
SDC1P18827 RPS27P5-201ENST00000444247 244 ntBASIC3.95□□□□□ -1.78
SDC1P18827 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.95□□□□□ -1.78
SDC1P18827 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.95□□□□□ -1.78
SDC1P18827 Z95152.1-201ENST00000453556 656 ntBASIC3.95□□□□□ -1.78
SDC1P18827 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.95□□□□□ -1.78
SDC1P18827 AC013356.1-201ENST00000489027 564 ntBASIC3.95□□□□□ -1.78
SDC1P18827 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.95□□□□□ -1.78
SDC1P18827 AC025674.1-201ENST00000507074 324 ntBASIC3.95□□□□□ -1.78
SDC1P18827 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.95□□□□□ -1.78
SDC1P18827 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.95□□□□□ -1.78
SDC1P18827 KCTD9P2-201ENST00000512203 1013 ntBASIC3.95□□□□□ -1.78
SDC1P18827 IGKV2-38-201ENST00000517443 247 ntBASIC3.95□□□□□ -1.78
SDC1P18827 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.95□□□□□ -1.78
SDC1P18827 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.95□□□□□ -1.78
SDC1P18827 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.95□□□□□ -1.78
SDC1P18827 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.95□□□□□ -1.78
SDC1P18827 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.95□□□□□ -1.78
SDC1P18827 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SDC1P18827 AL161729.3-201ENST00000603533 673 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms