Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 USP9YP4-201ENST00000424401 1745 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 ASNSP1-201ENST00000518311 1939 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 Y_RNA.62-201ENST00000362840 99 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 RNU6-618P-201ENST00000363518 112 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC019155.1-201ENST00000382242 574 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 NCSTNP1-201ENST00000406229 144 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC016397.1-201ENST00000412463 242 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AL357078.2-201ENST00000416486 427 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 RPL12P34-201ENST00000424532 479 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 DNAJC19P7-201ENST00000428811 344 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC068287.1-201ENST00000430283 295 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC099063.2-201ENST00000446360 662 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC010307.1-201ENST00000467206 836 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 RPS27AP13-201ENST00000498403 237 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 ATG10-AS1-201ENST00000504846 648 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC092593.2-201ENST00000513866 913 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 RAB9BP1-201ENST00000519581 626 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC090877.1-201ENST00000561418 344 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AL133457.1-201ENST00000564251 987 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 MIR5096-201ENST00000583713 70 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC006116.5-201ENST00000591936 559 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC022387.2-201ENST00000604050 448 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC012467.1-201ENST00000607740 256 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AL121890.3-201ENST00000618494 516 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC091905.1-201ENST00000624400 311 ntBASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
TRIM49D1C9J1S8 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 RNU4-39P-201ENST00000362455 127 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 U3.22-201ENST00000391120 215 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 HSPE1P8-201ENST00000406997 288 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 TPT1P2-201ENST00000413105 503 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 MTCO1P51-201ENST00000427672 1060 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AL691517.1-201ENST00000440833 1235 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC243772.1-201ENST00000451620 410 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 TRBV12-2-201ENST00000489763 344 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 NPM1P6-201ENST00000521088 871 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 CYCSP29-201ENST00000533731 318 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC099489.2-201ENST00000574976 260 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AF230666.2-201ENST00000602328 725 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AC025946.2-201ENST00000603398 234 ntBASIC3.91□□□□□ -1.78
TRIM49D1C9J1S8 AL356218.2-201ENST00000605264 187 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms