Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 uc_338.15-201ENST00000615470 191 ntBASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 OR2L1P-202ENST00000641567 1023 ntBASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 OR11H5P-202ENST00000641612 1325 ntBASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.63□□□□□ -1.35
CUEDC1Q9NWM3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC090337.1-201ENST00000579651 2074 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 Y_RNA.255-201ENST00000364581 97 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 RNU1-74P-201ENST00000384108 171 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 Y_RNA.489-201ENST00000384410 101 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 RPS20P2-201ENST00000402520 389 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 RNU2-6P-201ENST00000411404 190 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 RPL18AP14-201ENST00000417685 526 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 SLC35E1P1-201ENST00000419313 864 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AL034369.1-201ENST00000453808 477 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC021146.1-201ENST00000511202 716 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC006499.2-201ENST00000513470 337 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 CTSLP2-201ENST00000580501 394 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC011921.2-201ENST00000589465 152 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC011500.1-201ENST00000601963 469 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC007255.2-201ENST00000604053 631 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AC026634.1-201ENST00000634369 198 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 MTND5P10-201ENST00000603719 1809 ntBASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.62□□□□□ -1.35
CUEDC1Q9NWM3 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC134882.1-201ENST00000603738 1676 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 RNU6-108P-201ENST00000365558 107 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 RN7SKP271-201ENST00000410528 320 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 RPS26P40-201ENST00000435209 294 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 CXCR2P1-202ENST00000443392 1074 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 RPL7AP71-201ENST00000451120 739 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 RNU7-63P-201ENST00000459054 62 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 APOOP2-201ENST00000461561 539 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC006511.1-201ENST00000470614 315 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC233702.1-201ENST00000482905 502 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC023818.1-201ENST00000498379 384 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC098591.2-201ENST00000510152 315 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 EIF3KP3-201ENST00000514461 639 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC027667.1-201ENST00000545814 304 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 FXNP1-201ENST00000555153 337 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AC139493.1-201ENST00000604368 397 ntBASIC6.61□□□□□ -1.35
CUEDC1Q9NWM3 AL513218.1-201ENST00000606527 391 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms