Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 AP000255.1-201ENST00000610276 676 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 AC115115.1-201ENST00000449927 248 ntBASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 RN7SL601P-201ENST00000471221 293 ntBASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 AC022795.1-201ENST00000473808 480 ntBASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 TCP11X3P-202ENST00000514289 1254 ntBASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 AC055839.1-201ENST00000634467 498 ntBASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 AC032011.1-201ENST00000611703 1549 ntBASIC5.62□□□□□ -1.51
CCDC141Q6ZP82 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 OR6K3-202ENST00000368146 996 ntBASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 CBX1P3-201ENST00000413296 527 ntBASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 DPPA2P2-201ENST00000418220 897 ntBASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 EIF4EP1-201ENST00000422311 642 ntBASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 NPM1P25-201ENST00000429734 854 ntBASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 RPL23AP12-201ENST00000467573 473 ntBASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 AC090877.1-201ENST00000561418 344 ntBASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 AL121834.1-201ENST00000572284 509 ntBASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 AP005262.1-201ENST00000582646 997 ntBASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC141Q6ZP82 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 AC139713.2-215ENST00000641428 5037 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 DDX18P6-201ENST00000450119 1997 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 MIR218-2-201ENST00000385006 110 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 ATP5JP1-201ENST00000431631 322 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 OR52Y1P-201ENST00000452418 828 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 AL133244.1-201ENST00000456007 258 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 HMGN2P47-201ENST00000559378 272 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 ATE1-AS1-202ENST00000636460 506 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 AC244258.1-201ENST00000637553 1071 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 UBE3AP2-201ENST00000429033 2259 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 AC092435.4-201ENST00000623012 4159 ntBASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC141Q6ZP82 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 SNORA11C-201ENST00000408532 129 ntBASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 AL158156.1-201ENST00000422509 473 ntBASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 snoU13.24-201ENST00000458998 104 ntBASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 AC012123.2-201ENST00000485809 248 ntBASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 SNORA70.18-201ENST00000516696 98 ntBASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 UBTFL9-201ENST00000534504 1148 ntBASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 AC037471.2-201ENST00000564941 598 ntBASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CCDC141Q6ZP82 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC141Q6ZP82 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC141Q6ZP82 AC096644.3-201ENST00000416788 338 ntBASIC5.58□□□□□ -1.52
CCDC141Q6ZP82 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms