Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF40O75150 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF40O75150 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.46□□□□□ -1.22
RNF40O75150 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF40O75150 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF40O75150 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RNF40O75150 XPOTP1-201ENST00000443317 2398 ntBASIC7.46□□□□□ -1.22
RNF40O75150 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC7.46□□□□□ -1.22
RNF40O75150 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF40O75150 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF40O75150 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.45□□□□□ -1.22
RNF40O75150 AC105114.1-201ENST00000624795 1862 ntBASIC7.45□□□□□ -1.22
RNF40O75150 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF40O75150 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
RNF40O75150 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF40O75150 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF40O75150 RPL23AP57-201ENST00000332361 466 ntBASIC7.45□□□□□ -1.22
RNF40O75150 RNU6-890P-201ENST00000384121 107 ntBASIC7.45□□□□□ -1.22
RNF40O75150 FDPSP5-201ENST00000399474 1057 ntBASIC7.45□□□□□ -1.22
RNF40O75150 DHFRP6-201ENST00000401776 268 ntBASIC7.45□□□□□ -1.22
RNF40O75150 SNORA3.1-201ENST00000408166 111 ntBASIC7.45□□□□□ -1.22
RNF40O75150 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF40O75150 GEMIN2P2-201ENST00000418195 715 ntBASIC7.45□□□□□ -1.22
RNF40O75150 ATG3P1-201ENST00000419507 911 ntBASIC7.45□□□□□ -1.22
RNF40O75150 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC7.45□□□□□ -1.22
RNF40O75150 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF40O75150 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF40O75150 RN7SL836P-201ENST00000476140 296 ntBASIC7.45□□□□□ -1.22
RNF40O75150 RPS4XP23-201ENST00000487801 237 ntBASIC7.45□□□□□ -1.22
RNF40O75150 AK3P4-201ENST00000504283 583 ntBASIC7.45□□□□□ -1.22
RNF40O75150 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF40O75150 RNA5SP116-201ENST00000516132 98 ntBASIC7.45□□□□□ -1.22
RNF40O75150 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF40O75150 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF40O75150 HAUS8P1-201ENST00000549005 542 ntBASIC7.45□□□□□ -1.22
RNF40O75150 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.45□□□□□ -1.22
RNF40O75150 NDUFA3P4-201ENST00000560814 250 ntBASIC7.45□□□□□ -1.22
RNF40O75150 AL356432.3-201ENST00000568952 465 ntBASIC7.45□□□□□ -1.22
RNF40O75150 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF40O75150 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.45□□□□□ -1.22
RNF40O75150 MIR8062-201ENST00000621515 85 ntBASIC7.45□□□□□ -1.22
RNF40O75150 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF40O75150 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RNF40O75150 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF40O75150 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF40O75150 OR7E161P-202ENST00000641994 1033 ntBASIC7.45□□□□□ -1.22
RNF40O75150 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF40O75150 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.45□□□□□ -1.22
RNF40O75150 AC121333.1-201ENST00000567488 2709 ntBASIC7.45□□□□□ -1.22
RNF40O75150 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 AC034229.2-201ENST00000566945 2508 ntBASIC7.45□□□□□ -1.22
RNF40O75150 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.45□□□□□ -1.22
RNF40O75150 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.45□□□□□ -1.22
RNF40O75150 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.45□□□□□ -1.22
RNF40O75150 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RNF40O75150 AC083806.2-201ENST00000617795 2685 ntBASIC7.45□□□□□ -1.22
RNF40O75150 AC025125.1-201ENST00000624743 1922 ntBASIC7.44□□□□□ -1.22
RNF40O75150 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF40O75150 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 AL359195.2-201ENST00000623657 4412 ntBASIC7.44□□□□□ -1.22
RNF40O75150 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
RNF40O75150 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF40O75150 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.44□□□□□ -1.22
RNF40O75150 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.44□□□□□ -1.22
RNF40O75150 RNY4P16-201ENST00000364768 94 ntBASIC7.44□□□□□ -1.22
RNF40O75150 Y_RNA.350-201ENST00000365409 98 ntBASIC7.44□□□□□ -1.22
RNF40O75150 SNORA70.5-201ENST00000365519 135 ntBASIC7.44□□□□□ -1.22
RNF40O75150 RNU4-2-201ENST00000365668 141 ntBASIC7.44□□□□□ -1.22
RNF40O75150 RNU6-601P-201ENST00000384540 107 ntBASIC7.44□□□□□ -1.22
RNF40O75150 RNU6-903P-201ENST00000391270 109 ntBASIC7.44□□□□□ -1.22
RNF40O75150 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF40O75150 ARL5AP1-201ENST00000418991 388 ntBASIC7.44□□□□□ -1.22
RNF40O75150 AL139396.1-201ENST00000421137 167 ntBASIC7.44□□□□□ -1.22
RNF40O75150 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF40O75150 HMGB1P9-201ENST00000429856 646 ntBASIC7.44□□□□□ -1.22
RNF40O75150 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF40O75150 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF40O75150 MED28P3-201ENST00000444288 531 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms