Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC100814.1-201ENST00000606963 623 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC010435.1-201ENST00000623353 1177 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AP000843.1-201ENST00000624880 701 ntBASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM49D1C9J1S8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 LARP1BP1-201ENST00000506036 1359 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 OR4K17-201ENST00000315543 1032 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 MIR383-201ENST00000362257 73 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 RNU1-32P-201ENST00000363937 159 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 RNU6-670P-201ENST00000364312 104 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 RNA5SP509-201ENST00000364577 119 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 ATP5F1P4-201ENST00000397288 746 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 RPS27AP7-201ENST00000422792 455 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 RAB9AP5-201ENST00000437794 597 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 MTCO3P43-201ENST00000440974 771 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC114878.1-201ENST00000441166 358 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 RAB9AP2-201ENST00000443911 597 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 RANP8-201ENST00000444720 713 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC009220.1-201ENST00000451614 275 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 OR52Y1P-201ENST00000452418 828 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 MTND6P32-201ENST00000457611 483 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 snoU13.1-201ENST00000459157 104 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 RN7SL303P-201ENST00000469773 251 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 MTCYBP19-201ENST00000517463 1124 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AP003168.1-201ENST00000530091 307 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC025423.2-201ENST00000537570 439 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC141257.3-201ENST00000572906 215 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC015911.5-201ENST00000587076 451 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AC073111.2-201ENST00000605657 1075 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 BRDTP1-201ENST00000605735 677 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 MIR6868-201ENST00000611215 58 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 AL162574.2-201ENST00000614618 657 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 MIR7641-1-201ENST00000627518 61 ntBASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM49D1C9J1S8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 OR13C3-201ENST00000374781 1108 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 MIR141-201ENST00000384975 95 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 HLFP1-201ENST00000402375 499 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 RPL23AP26-201ENST00000412728 464 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 VN1R31P-201ENST00000417498 730 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AL356806.1-201ENST00000422524 916 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 IPMKP1-201ENST00000425988 855 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 RPS11P1-201ENST00000451072 473 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 RN7SL860P-201ENST00000473738 223 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AL390816.3-201ENST00000604527 1066 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AC019193.2-201ENST00000610012 634 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 AP003400.6-201ENST00000624698 740 ntBASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TRIM49D1C9J1S8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms