Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
PHRF1Q9P1Y6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PHRF1Q9P1Y6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.11□□□□□ -1.59
PHRF1Q9P1Y6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 SNORD9-201ENST00000362566 104 ntBASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 AC005300.1-201ENST00000428401 373 ntBASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 APOOP2-201ENST00000461561 539 ntBASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 AP000563.1-201ENST00000490865 758 ntBASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 AC021146.3-201ENST00000511911 260 ntBASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 NAMPTP1-201ENST00000440465 2514 ntBASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 DDX18P4-201ENST00000511690 1966 ntBASIC5.1□□□□□ -1.59
PHRF1Q9P1Y6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 AC005261.6-201ENST00000623072 1387 ntBASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 AC022795.1-201ENST00000473808 480 ntBASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 GTF2IP8-201ENST00000560687 584 ntBASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 AC022146.1-201ENST00000595307 847 ntBASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PHRF1Q9P1Y6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
PHRF1Q9P1Y6 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 RNA5SP146-201ENST00000410743 123 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 GNG5P5-201ENST00000420444 220 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 RPL21P11-201ENST00000461458 483 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 MIMT1-201ENST00000597105 1050 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AL353600.1-201ENST00000608148 251 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 CDY11P-201ENST00000447168 1651 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 ATP5JP1-201ENST00000431631 322 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC092641.1-201ENST00000440229 772 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 RN7SKP83-201ENST00000516512 178 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 UBTFL9-201ENST00000534504 1148 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 MTND6P33-201ENST00000571794 183 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC079880.2-201ENST00000603790 1213 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AL137843.1-201ENST00000605078 385 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 AC244258.1-201ENST00000637553 1071 ntBASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PHRF1Q9P1Y6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 RPL7AP73-201ENST00000413490 353 ntBASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 SETP9-201ENST00000423837 832 ntBASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 AC017083.1-201ENST00000428093 483 ntBASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 OR6C71P-201ENST00000432580 913 ntBASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 RN7SKP57-201ENST00000517248 293 ntBASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 RANP9-201ENST00000519957 271 ntBASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 OR7E13P-201ENST00000526052 910 ntBASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 AC233702.9-201ENST00000581528 203 ntBASIC5.07□□□□□ -1.6
PHRF1Q9P1Y6 AC011816.2-201ENST00000607089 556 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms