| ATG9A | Q7Z3C6 | AL163051.2-201 | ENST00000618976 | 735 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | SMCR2_2.1-201 | ENST00000619783 | 161 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC097460.3-201 | ENST00000623099 | 442 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC112484.5-201 | ENST00000624189 | 228 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC010872.1-201 | ENST00000624225 | 675 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | COA1-220 | ENST00000640232 | 192 nt | APPRIS ALT2 TSL 3 BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | VEZT-201 | ENST00000261219 | 3435 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | MTUS1-201 | ENST00000262102 | 6160 nt | TSL 1 (best) BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC022893.2-201 | ENST00000564832 | 3296 nt | BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | PLCB1-210 | ENST00000612075 | 6576 nt | TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | HGF-202 | ENST00000354224 | 1425 nt | TSL 1 (best) BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | ZNF705A-201 | ENST00000359286 | 3455 nt | APPRIS P1 TSL 2 BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | KIAA1456-203 | ENST00000524591 | 9587 nt | APPRIS P1 TSL 5 BASIC | 5.13 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AK9-201 | ENST00000285397 | 2566 nt | TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | ZNF679-202 | ENST00000421025 | 1567 nt | APPRIS P1 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | NBPF10-201 | ENST00000583866 | 13042 nt | APPRIS P1 TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | ROS1-201 | ENST00000368507 | 7417 nt | APPRIS ALT2 TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | OR5F1-201 | ENST00000278409 | 945 nt | APPRIS P1 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | RNU1-15P-201 | ENST00000353977 | 144 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | SNORA63.3-201 | ENST00000362682 | 132 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | ENSAP1-201 | ENST00000392855 | 326 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | UQCRFS1P3-201 | ENST00000407697 | 385 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | MIR1179-201 | ENST00000408703 | 91 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | TPT1P2-201 | ENST00000413105 | 503 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | ITCH-IT1-201 | ENST00000418598 | 208 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL590609.2-201 | ENST00000421430 | 368 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC016912.1-201 | ENST00000432241 | 545 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL353681.1-201 | ENST00000435828 | 731 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | ARL4AP3-201 | ENST00000441452 | 574 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL133244.1-201 | ENST00000456007 | 258 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | NECTIN3-AS1-202 | ENST00000467426 | 664 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC108729.2-201 | ENST00000476543 | 840 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC123768.1-201 | ENST00000486285 | 432 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | RN7SL604P-201 | ENST00000492589 | 296 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | LINC02430-201 | ENST00000504755 | 476 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC006063.1-201 | ENST00000512511 | 560 nt | TSL 4 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | LINC01603-201 | ENST00000517343 | 1134 nt | TSL 2 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | DYNLL1P4-201 | ENST00000549314 | 266 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL355096.1-201 | ENST00000553561 | 447 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC020891.1-201 | ENST00000558785 | 174 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | MTCO3P22-201 | ENST00000603219 | 784 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | BNIP3P31-201 | ENST00000604515 | 566 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC026979.4-201 | ENST00000606555 | 645 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL662844.3-201 | ENST00000606909 | 517 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | MIR1264-201 | ENST00000616374 | 69 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC131238.1-201 | ENST00000617135 | 328 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC023509.5-201 | ENST00000617434 | 807 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | FAM26D-205 | ENST00000628083 | 1117 nt | TSL 2 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | LINC02109-206 | ENST00000629527 | 854 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | SLC44A5-202 | ENST00000370859 | 3896 nt | APPRIS ALT2 TSL 2 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | SPAM1-201 | ENST00000223028 | 2007 nt | APPRIS ALT2 TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC116667.1-201 | ENST00000604855 | 2072 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | SLC44A5-201 | ENST00000370855 | 4406 nt | APPRIS P3 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | DCX-202 | ENST00000358070 | 9405 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | PLCZ1-206 | ENST00000538330 | 1612 nt | TSL 2 BASIC | 5.12 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | ALS2CR12-201 | ENST00000286190 | 1769 nt | APPRIS P3 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | WDR72-202 | ENST00000396328 | 7507 nt | APPRIS P2 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | ELF2-203 | ENST00000379550 | 3278 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | OR11H4-201 | ENST00000315409 | 1082 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | GCNT6-201 | ENST00000379591 | 934 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL034376.1-201 | ENST00000380106 | 484 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | IFNA21-201 | ENST00000380225 | 1024 nt | APPRIS P1 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | RNU6-1176P-201 | ENST00000390955 | 107 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | PPIAP31-201 | ENST00000405422 | 495 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | RN7SKP263-201 | ENST00000411194 | 309 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL136368.1-201 | ENST00000416249 | 401 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | MTND2P9-201 | ENST00000422293 | 931 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | HSFY1P1-201 | ENST00000423928 | 1178 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL357832.1-201 | ENST00000427460 | 420 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC073335.1-201 | ENST00000427776 | 363 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL117339.2-201 | ENST00000430475 | 180 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | LPP-AS1-201 | ENST00000434996 | 494 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC105398.1-201 | ENST00000446073 | 402 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | CNTN4-AS2-201 | ENST00000447256 | 426 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC092832.2-201 | ENST00000456621 | 389 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | PDCD10-206 | ENST00000470131 | 1026 nt | APPRIS P1 TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC092902.1-201 | ENST00000486999 | 259 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | UBA52P3-201 | ENST00000491303 | 382 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL132838.2-201 | ENST00000492041 | 314 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | KRT19P6-201 | ENST00000510983 | 209 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | MTATP6P9-201 | ENST00000515039 | 680 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | snoU109.6-201 | ENST00000516831 | 118 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | TRAPPC2P2-201 | ENST00000517589 | 409 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | C8orf22-204 | ENST00000522267 | 739 nt | APPRIS ALT1 TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AP000462.1-201 | ENST00000535704 | 818 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC104072.1-201 | ENST00000568817 | 668 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | APOC2-203 | ENST00000590360 | 744 nt | APPRIS P1 TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | RPS4XP16-203 | ENST00000596904 | 698 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | MTCO2P22-201 | ENST00000603246 | 681 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL391834.1-201 | ENST00000609609 | 560 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | YWHAEP7-201 | ENST00000617508 | 639 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC022306.3-201 | ENST00000619930 | 550 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AL138955.1-201 | ENST00000622881 | 1040 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | AC138907.10-201 | ENST00000623708 | 983 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | OR11H4-203 | ENST00000641525 | 1082 nt | APPRIS P1 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | MTND4P9-201 | ENST00000507819 | 1346 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | SMC2-AS1-201 | ENST00000603487 | 7020 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | BBX-206 | ENST00000415149 | 8930 nt | APPRIS P3 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | SLCO1A2-201 | ENST00000307378 | 7682 nt | APPRIS P1 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| ATG9A | Q7Z3C6 | RMDN2-204 | ENST00000406384 | 1932 nt | APPRIS P1 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |