Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AL117187.1-201ENST00000555482 181 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC009597.2-201ENST00000604659 592 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AC103710.4-201ENST00000609301 899 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 MAPK10-344ENST00000641718 3746 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.6□□□□□ -1.19
RC3H1Q5TC82 AP002370.1-201ENST00000528055 1602 ntBASIC7.6□□□□□ -1.19
RC3H1Q5TC82 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC092821.2-201ENST00000545710 2042 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 PARP4P2-201ENST00000446672 3326 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC109780.1-201ENST00000451768 1344 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AL449283.1-201ENST00000602631 3403 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 OR5J1P-201ENST00000313544 939 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 FAM32BP-201ENST00000344033 333 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC005294.1-201ENST00000355509 281 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 RNU6-462P-201ENST00000362659 105 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 SNORA74A-201ENST00000364089 198 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 RNU6-74P-201ENST00000384235 107 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 RNU6-171P-201ENST00000384354 107 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 RNU6-510P-201ENST00000391239 108 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 VN1R8P-201ENST00000407739 893 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AL162395.1-201ENST00000457882 422 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC063943.1-201ENST00000465434 453 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC108120.2-201ENST00000512973 294 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC112206.3-201ENST00000514578 389 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 Y_RNA.691-201ENST00000516611 103 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AP006245.2-201ENST00000522004 300 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC087241.2-201ENST00000535801 324 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 DPPA3P2-202ENST00000557188 1219 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 MIR4700-201ENST00000578311 74 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 MIR5095-201ENST00000578844 88 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 NUTF2P8-201ENST00000604593 363 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC145423.1-201ENST00000605712 336 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC104237.2-201ENST00000612456 443 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 MIR8089-201ENST00000620165 82 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC040168.1-201ENST00000623594 991 ntBASIC7.59□□□□□ -1.19
RC3H1Q5TC82 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
RC3H1Q5TC82 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
RC3H1Q5TC82 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
RC3H1Q5TC82 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC092111.1-201ENST00000618256 3358 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 OR4A15-201ENST00000314706 1035 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC067945.1-201ENST00000342609 618 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 Y_RNA.184-201ENST00000363884 108 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 RNU6-1300P-201ENST00000391046 108 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 MTND3P8-201ENST00000412909 339 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC114482.1-201ENST00000418010 247 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 RAD23BP1-201ENST00000421404 1227 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC005033.1-201ENST00000428904 813 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 HMGB3P24-201ENST00000433260 622 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 RPS27AP3-201ENST00000453803 454 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 DNAJB5P1-201ENST00000454004 806 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC112206.1-201ENST00000468416 477 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 RPL7P39-201ENST00000481157 744 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AP003467.2-201ENST00000520175 319 ntBASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.58□□□□□ -1.2
RC3H1Q5TC82 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms