Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DQB2P05538 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DQB2P05538 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
HLA-DQB2P05538 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HLA-DQB2P05538 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
HLA-DQB2P05538 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
HLA-DQB2P05538 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
HLA-DQB2P05538 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 U1.1-201ENST00000384101 164 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 ATP5HP2-201ENST00000433885 485 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AC104306.1-201ENST00000449702 371 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 CYCSP53-201ENST00000455540 265 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AC084198.1-201ENST00000477747 402 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 RAC1P2-201ENST00000511164 579 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 SCARNA14-201ENST00000516903 136 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AC005255.1-201ENST00000593748 216 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AL390816.3-201ENST00000604527 1066 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AC079684.1-201ENST00000621405 437 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 AC016717.3-201ENST00000624730 554 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 CUL4AP1-201ENST00000514750 1863 ntBASIC3.9□□□□□ -1.79
HLA-DQB2P05538 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HLA-DQB2P05538 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AL450326.2-201ENST00000421913 1962 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 DDX18P3-201ENST00000404856 2007 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 RNA5SP479-201ENST00000364858 117 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 RNU6-1320P-201ENST00000390838 107 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 RNU6-1269P-201ENST00000391139 107 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 SNORA81-201ENST00000408493 178 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC073136.2-201ENST00000417282 849 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC007064.3-201ENST00000422608 359 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 RNU6-599P-201ENST00000459383 107 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 RNU6-1193P-201ENST00000459461 107 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 RN7SL323P-201ENST00000494712 295 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC010342.1-201ENST00000514047 877 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC022695.1-201ENST00000522089 237 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 MIR4286-201ENST00000580651 93 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 AC015849.6-201ENST00000605454 474 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 RNU6-368P-201ENST00000620928 107 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 MIR4727-201ENST00000622232 55 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 RNU6-538P-201ENST00000622329 107 ntBASIC3.89□□□□□ -1.79
HLA-DQB2P05538 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.89□□□□□ -1.79
HLA-DQB2P05538 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 RN7SKP227-201ENST00000364445 330 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 RN7SKP263-201ENST00000411194 309 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 MTND2P11-201ENST00000423638 648 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AC106901.1-201ENST00000425086 698 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.88□□□□□ -1.79
HLA-DQB2P05538 SNORA71B-202ENST00000439232 272 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 RPS29P7-201ENST00000439662 171 ntBASIC3.88□□□□□ -1.79
HLA-DQB2P05538 AC107015.1-201ENST00000466902 747 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms