Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC022164.1-201ENST00000568767 2673 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RNA5SP507-201ENST00000363603 121 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC009804.1-201ENST00000400949 179 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 NUP35P2-201ENST00000416748 943 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AL121878.1-201ENST00000418638 859 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 OFD1P18Y-201ENST00000420889 959 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AL133173.1-201ENST00000423458 397 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 OR7E116P-201ENST00000448529 957 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC013267.1-201ENST00000458227 267 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AP000852.1-201ENST00000472460 573 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC104687.1-201ENST00000485829 412 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 RN7SL346P-201ENST00000491561 294 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 RNA5SP92-201ENST00000516437 110 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC134698.5-201ENST00000519444 336 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AP004607.2-201ENST00000533949 322 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 HAUS8P1-201ENST00000549005 542 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC096996.1-201ENST00000563813 325 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC137800.2-201ENST00000574375 120 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC044792.1-201ENST00000593294 196 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 SUGT1P3-202ENST00000604259 383 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC055764.2-201ENST00000610089 670 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 MIR6863-201ENST00000636112 90 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AL592429.1-201ENST00000403909 1473 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC100871.1-201ENST00000507871 1456 ntBASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SYNGAP1Q96PV0 SNORD1C-201ENST00000363315 78 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 Y_RNA.296-201ENST00000364930 108 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL161909.1-201ENST00000397390 712 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 EI24P3-201ENST00000399046 1062 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 MIR1284-201ENST00000408337 120 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 USP9YP13-201ENST00000417797 480 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC092427.1-201ENST00000439177 601 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL450023.1-201ENST00000450868 751 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 HMGN1P10-201ENST00000474557 553 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 RPL7P6-201ENST00000480903 738 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 RN7SL30P-201ENST00000488416 306 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC073610.1-201ENST00000489971 396 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC138409.2-202ENST00000507274 458 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 MTND3P22-201ENST00000510932 243 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AF131216.2-201ENST00000512316 564 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 RNU6-416P-201ENST00000516265 103 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC123904.3-201ENST00000547218 814 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 HMGN2P6-201ENST00000551091 273 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL133457.1-201ENST00000564251 987 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AP005119.2-201ENST00000579735 1105 ntBASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.5□□□□□ -1.37
SYNGAP1Q96PV0 AL117336.2-201ENST00000602435 335 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms