Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC42Q96M95 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 AC091515.1-201ENST00000548110 679 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 AC091516.1-201ENST00000549191 703 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 CBX3P5-201ENST00000552017 521 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 IPO5P1-202ENST00000600039 287 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 AC010608.2-201ENST00000624830 470 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 ATE1-AS1-202ENST00000636460 506 ntBASIC4.22□□□□□ -1.73
CCDC42Q96M95 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC42Q96M95 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC42Q96M95 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC42Q96M95 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC42Q96M95 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC42Q96M95 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC42Q96M95 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC42Q96M95 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC42Q96M95 RNU4-39P-201ENST00000362455 127 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC093719.1-202ENST00000392735 373 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 CYB5AP4-201ENST00000396692 399 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 ATP5F1P4-201ENST00000397288 746 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC42Q96M95 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 DPY19L1P2-201ENST00000426647 915 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC023141.6-201ENST00000429418 337 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 EXTL2P1-201ENST00000446218 416 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 RPS11P1-201ENST00000451072 473 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC098824.1-201ENST00000453565 980 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 UQCRHP4-201ENST00000471686 272 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC093840.1-201ENST00000511599 336 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC137768.1-201ENST00000549998 553 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC090877.1-201ENST00000561418 344 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AL133457.1-201ENST00000564251 987 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC015849.6-201ENST00000605454 474 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC090948.2-201ENST00000607363 564 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC091905.1-201ENST00000624400 311 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 AC011944.2-201ENST00000624440 683 ntBASIC4.21□□□□□ -1.74
CCDC42Q96M95 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC42Q96M95 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC42Q96M95 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC42Q96M95 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC42Q96M95 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 AP002001.2-201ENST00000529025 1469 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 OR13C3-201ENST00000374781 1108 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC42Q96M95 U3.22-201ENST00000391120 215 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 HSPE1P8-201ENST00000406997 288 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 RN7SKP33-201ENST00000410942 340 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 TPT1P2-201ENST00000413105 503 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 VN1R31P-201ENST00000417498 730 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC099336.2-201ENST00000422457 254 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 OR5AW1P-201ENST00000426334 1006 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 RPS26P47-201ENST00000427219 348 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 RAB9AP5-201ENST00000437794 597 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 RAB9AP2-201ENST00000443911 597 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC099560.2-201ENST00000457554 255 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 RPL21P71-201ENST00000465598 459 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC092747.2-201ENST00000545069 983 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC009101.1-201ENST00000568135 242 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC141257.3-201ENST00000572906 215 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 SNX6P1-201ENST00000601728 1224 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 AL390816.3-201ENST00000604527 1066 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC244205.2-202ENST00000635781 342 ntBASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC42Q96M95 AC106871.1-201ENST00000568324 3102 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms