Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 RPL7P48-201ENST00000461513 746 ntBASIC4.55□□□□□ -1.68
KRT3P12035 RPS27AP16-201ENST00000492222 470 ntBASIC4.55□□□□□ -1.68
KRT3P12035 RN7SL810P-201ENST00000493031 276 ntBASIC4.55□□□□□ -1.68
KRT3P12035 SNORA76.2-201ENST00000517095 137 ntBASIC4.55□□□□□ -1.68
KRT3P12035 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT3P12035 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.55□□□□□ -1.68
KRT3P12035 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.55□□□□□ -1.68
KRT3P12035 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.55□□□□□ -1.68
KRT3P12035 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT3P12035 AC025918.2-201ENST00000558683 763 ntBASIC4.55□□□□□ -1.68
KRT3P12035 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.55□□□□□ -1.68
KRT3P12035 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.55□□□□□ -1.68
KRT3P12035 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT3P12035 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.55□□□□□ -1.68
KRT3P12035 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.55□□□□□ -1.68
KRT3P12035 AL035461.2-201ENST00000619201 524 ntBASIC4.55□□□□□ -1.68
KRT3P12035 MIR7154-201ENST00000620673 73 ntBASIC4.55□□□□□ -1.68
KRT3P12035 AP000346.3-201ENST00000622821 210 ntBASIC4.55□□□□□ -1.68
KRT3P12035 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT3P12035 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT3P12035 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
KRT3P12035 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT3P12035 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.55□□□□□ -1.68
KRT3P12035 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KRT3P12035 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT3P12035 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT3P12035 AL445437.1-201ENST00000623157 3087 ntBASIC4.54□□□□□ -1.68
KRT3P12035 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT3P12035 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT3P12035 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
KRT3P12035 MTND4P26-201ENST00000415971 1359 ntBASIC4.54□□□□□ -1.68
KRT3P12035 AL049555.1-201ENST00000562834 1933 ntBASIC4.54□□□□□ -1.68
KRT3P12035 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT3P12035 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.54□□□□□ -1.68
KRT3P12035 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 AC105074.1-201ENST00000623380 3095 ntBASIC4.54□□□□□ -1.68
KRT3P12035 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
KRT3P12035 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT3P12035 MIR448-201ENST00000362131 111 ntBASIC4.54□□□□□ -1.68
KRT3P12035 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
KRT3P12035 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRT3P12035 RNU6-452P-201ENST00000384406 107 ntBASIC4.54□□□□□ -1.68
KRT3P12035 HSPD1P16-201ENST00000402302 394 ntBASIC4.54□□□□□ -1.68
KRT3P12035 RPS4XP9-201ENST00000405151 780 ntBASIC4.54□□□□□ -1.68
KRT3P12035 RNA5SP498-201ENST00000411342 120 ntBASIC4.54□□□□□ -1.68
KRT3P12035 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 RPS23P10-201ENST00000416185 486 ntBASIC4.54□□□□□ -1.68
KRT3P12035 MORF4L1P7-201ENST00000426038 703 ntBASIC4.54□□□□□ -1.68
KRT3P12035 CNOT7P1-201ENST00000429006 852 ntBASIC4.54□□□□□ -1.68
KRT3P12035 MTCO3P21-201ENST00000430791 643 ntBASIC4.54□□□□□ -1.68
KRT3P12035 CEACAMP1-201ENST00000434624 1035 ntBASIC4.54□□□□□ -1.68
KRT3P12035 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.54□□□□□ -1.68
KRT3P12035 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT3P12035 RPS29P33-201ENST00000456717 146 ntBASIC4.54□□□□□ -1.68
KRT3P12035 snoU13.1-201ENST00000459157 104 ntBASIC4.54□□□□□ -1.68
KRT3P12035 RN7SL98P-201ENST00000462271 300 ntBASIC4.54□□□□□ -1.68
KRT3P12035 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT3P12035 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 MTND6P6-201ENST00000478031 263 ntBASIC4.54□□□□□ -1.68
KRT3P12035 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.54□□□□□ -1.68
KRT3P12035 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.54□□□□□ -1.68
KRT3P12035 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT3P12035 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 MTND1P36-201ENST00000522384 936 ntBASIC4.54□□□□□ -1.68
KRT3P12035 SMARCE1P4-201ENST00000523647 241 ntBASIC4.54□□□□□ -1.68
KRT3P12035 OR8G5-201ENST00000524943 1041 ntBASIC4.54□□□□□ -1.68
KRT3P12035 OR4R2P-201ENST00000530815 597 ntBASIC4.54□□□□□ -1.68
KRT3P12035 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT3P12035 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 AL121834.1-201ENST00000572284 509 ntBASIC4.54□□□□□ -1.68
KRT3P12035 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT3P12035 AL354984.3-201ENST00000604803 325 ntBASIC4.54□□□□□ -1.68
KRT3P12035 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.54□□□□□ -1.68
KRT3P12035 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.54□□□□□ -1.68
KRT3P12035 AC007546.1-201ENST00000619452 559 ntBASIC4.54□□□□□ -1.68
KRT3P12035 AP000720.1-201ENST00000625091 483 ntBASIC4.54□□□□□ -1.68
KRT3P12035 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.54□□□□□ -1.68
KRT3P12035 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT3P12035 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT3P12035 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
KRT3P12035 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KRT3P12035 AC010300.1-201ENST00000600671 5134 ntBASIC4.54□□□□□ -1.68
KRT3P12035 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KRT3P12035 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
KRT3P12035 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRT3P12035 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRT3P12035 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
KRT3P12035 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.53□□□□□ -1.68
KRT3P12035 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRT3P12035 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
KRT3P12035 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
KRT3P12035 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
KRT3P12035 RNA5SP447-201ENST00000363749 119 ntBASIC4.53□□□□□ -1.68
KRT3P12035 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
KRT3P12035 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.53□□□□□ -1.68
KRT3P12035 AC010385.1-201ENST00000412374 256 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 242.5 ms