Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
DDX39AO00148 SNORA70C-201ENST00000384538 135 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 YY1P1-201ENST00000427625 668 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 COX6B1P7-201ENST00000430845 235 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX39AO00148 AL512326.1-201ENST00000443050 721 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
DDX39AO00148 AL513343.1-201ENST00000451818 792 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX39AO00148 SYT14P1-201ENST00000481459 721 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AF213884.1-201ENST00000488102 463 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AC111193.1-201ENST00000504097 155 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX39AO00148 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.81□□□□□ -1.64
DDX39AO00148 RN7SKP141-201ENST00000516167 338 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.81□□□□□ -1.64
DDX39AO00148 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX39AO00148 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX39AO00148 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX39AO00148 AL109766.1-201ENST00000555080 552 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX39AO00148 NF1P5-201ENST00000588287 448 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AC115085.1-201ENST00000588924 229 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AL161729.3-201ENST00000603533 673 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AL591034.3-201ENST00000605511 685 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AP006248.2-201ENST00000623309 592 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
DDX39AO00148 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
DDX39AO00148 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
DDX39AO00148 Z82217.1-201ENST00000625157 8149 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 AC074029.4-201ENST00000624796 1859 ntBASIC4.81□□□□□ -1.64
DDX39AO00148 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
DDX39AO00148 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX39AO00148 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX39AO00148 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
DDX39AO00148 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX39AO00148 SNORD51.1-201ENST00000365405 77 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX39AO00148 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX39AO00148 AL590290.1-201ENST00000405336 380 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 MTND3P20-201ENST00000407663 186 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX39AO00148 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX39AO00148 MTND4P24-201ENST00000424002 397 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 RPL34P6-201ENST00000432390 345 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX39AO00148 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX39AO00148 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX39AO00148 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX39AO00148 TPT1P1-201ENST00000458495 518 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 AC093663.2-201ENST00000484625 313 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 KCTD9P2-201ENST00000512203 1013 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 VTA1P2-201ENST00000520205 911 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 MIR3936-201ENST00000584304 110 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.8□□□□□ -1.64
DDX39AO00148 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.8□□□□□ -1.64
DDX39AO00148 AL355802.4-201ENST00000607635 548 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 BNIP3P41-202ENST00000616656 861 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 AC025016.1-201ENST00000616746 682 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 AL138721.1-201ENST00000616756 179 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.8□□□□□ -1.64
DDX39AO00148 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 AL353743.4-201ENST00000422653 1547 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 AC009951.1-201ENST00000623674 2614 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.8□□□□□ -1.64
DDX39AO00148 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
DDX39AO00148 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
DDX39AO00148 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DDX39AO00148 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
DDX39AO00148 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
DDX39AO00148 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
DDX39AO00148 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
DDX39AO00148 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
DDX39AO00148 RPS26P8-201ENST00000393490 348 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX39AO00148 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX39AO00148 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.79□□□□□ -1.64
DDX39AO00148 EIF1P3-201ENST00000423841 334 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX39AO00148 FO393419.3-201ENST00000428741 282 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 RPS27AP12-201ENST00000429552 465 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX39AO00148 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms