Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AL022331.1-201ENST00000429025 477 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 C8orf59P1-201ENST00000429930 303 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RPL7P4-203ENST00000430239 730 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RPS25P9-201ENST00000435591 252 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RPL23AP19-201ENST00000436229 369 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RPS24P1-201ENST00000438550 371 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC073587.1-201ENST00000447093 876 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AL645937.3-201ENST00000453647 936 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RN7SL515P-201ENST00000463999 297 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC072039.1-201ENST00000477611 581 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC025458.1-201ENST00000506046 166 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC048346.1-201ENST00000510247 144 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RN7SL52P-201ENST00000584271 284 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC022146.1-201ENST00000595307 847 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC009237.13-201ENST00000603193 276 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC005332.10-201ENST00000612725 619 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RN7SL787P-201ENST00000613000 284 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RN7SL544P-201ENST00000617232 284 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC018926.3-201ENST00000618841 406 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AL031667.3-201ENST00000620124 655 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 RN7SL763P-201ENST00000620922 284 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AC016717.3-201ENST00000624730 554 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AL355480.1-201ENST00000629041 99 ntBASIC5.86□□□□□ -1.47
CCDC66A2RUB6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC66A2RUB6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 RNA5SP273-201ENST00000362484 113 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 RNU4-21P-201ENST00000362802 126 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 RNA5SP122-201ENST00000384457 108 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 SNORA48.4-201ENST00000391089 134 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AL009179.1-201ENST00000406085 265 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 TPMTP3-201ENST00000411928 735 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 PGBD4P8-201ENST00000412993 562 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 IPPKP1-201ENST00000422501 768 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC007559.1-201ENST00000428736 355 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 RPL31P54-201ENST00000429803 370 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 TXNP5-201ENST00000441043 315 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC022215.1-201ENST00000481770 362 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC091912.1-201ENST00000511351 248 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 TCP11X3P-202ENST00000514289 1254 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 Y_RNA.667-201ENST00000516212 107 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 RNU6-720P-201ENST00000516363 108 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 RNA5SP438-201ENST00000516561 112 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 RNA5SP135-201ENST00000517019 125 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 TRIM51DP-201ENST00000529746 596 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC125612.1-201ENST00000547580 377 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AC128687.1-201ENST00000605304 619 ntBASIC5.85□□□□□ -1.47
CCDC66A2RUB6 AL096712.1-201ENST00000614561 159 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms