Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 HIGD1AP4-201ENST00000430194 280 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 RPL23AP12-201ENST00000467573 473 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 MORF4L2P1-201ENST00000503761 858 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 IGLV3-26-201ENST00000520756 302 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 MIR4672-201ENST00000583126 81 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 AC020914.6-201ENST00000594327 272 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 AC095038.2-201ENST00000621464 1070 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 AC119674.1-207ENST00000641355 633 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 Z95327.2-201ENST00000414579 1873 ntBASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHANK3Q9BYB0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 RNU6-316P-201ENST00000391027 107 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 REREP1Y-201ENST00000422655 198 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 REREP2Y-201ENST00000439103 200 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 RANP8-201ENST00000444720 713 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 RPL21P8-201ENST00000465083 535 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 RN7SL807P-201ENST00000470923 297 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 AC084759.1-201ENST00000561168 290 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 PCA3_2.1-201ENST00000612507 409 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 MIR8058-201ENST00000615737 89 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 AC125336.1-201ENST00000508893 2827 ntBASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHANK3Q9BYB0 RPL7P60-201ENST00000397636 735 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 RPL7P44-201ENST00000424827 742 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AL831737.1-201ENST00000441288 271 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 RPL7P23-201ENST00000493874 747 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AC012493.2-201ENST00000595083 291 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AC243312.2-201ENST00000623340 601 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 CYCSP4-201ENST00000429682 331 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 TPT1P1-201ENST00000458495 518 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AC012158.1-204ENST00000483430 465 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 HIGD1AP18-201ENST00000520730 278 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 RPL21P7-201ENST00000557463 483 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 AC135507.2-201ENST00000612443 309 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.03□□□□□ -1.6
SHANK3Q9BYB0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 MTND2P15-201ENST00000418575 892 ntBASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 SNORA70.18-201ENST00000516696 98 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms