Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.75□□□□□ -1.65
BRCA1P38398 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA1P38398 AC097462.2-201ENST00000504623 481 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCA1P38398 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA1P38398 AC025627.2-201ENST00000576220 160 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA1P38398 AL451044.1-201ENST00000604867 238 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCA1P38398 MIR8069-1-201ENST00000616627 86 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 MIR8069-2-201ENST00000621412 86 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA1P38398 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA1P38398 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA1P38398 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA1P38398 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA1P38398 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA1P38398 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
BRCA1P38398 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
BRCA1P38398 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
BRCA1P38398 AC092435.3-201ENST00000565538 3654 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA1P38398 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA1P38398 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
BRCA1P38398 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA1P38398 OR4K6P-201ENST00000416478 897 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 AC017083.1-201ENST00000428093 483 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA1P38398 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRCA1P38398 AC012158.1-204ENST00000483430 465 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA1P38398 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCA1P38398 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.75□□□□□ -1.65
BRCA1P38398 AC016252.1-201ENST00000609721 474 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.75□□□□□ -1.65
BRCA1P38398 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.75□□□□□ -1.65
BRCA1P38398 AP001284.1-201ENST00000528393 2118 ntBASIC4.75□□□□□ -1.65
BRCA1P38398 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRCA1P38398 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCA1P38398 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
BRCA1P38398 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCA1P38398 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRCA1P38398 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRCA1P38398 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
BRCA1P38398 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
BRCA1P38398 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
BRCA1P38398 AL035423.1-201ENST00000420331 213 ntBASIC4.74□□□□□ -1.65
BRCA1P38398 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCA1P38398 AC006994.1-201ENST00000438212 839 ntBASIC4.74□□□□□ -1.65
BRCA1P38398 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCA1P38398 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCA1P38398 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.74□□□□□ -1.65
BRCA1P38398 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCA1P38398 SNORA70.17-201ENST00000516449 133 ntBASIC4.74□□□□□ -1.65
BRCA1P38398 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.74□□□□□ -1.65
BRCA1P38398 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCA1P38398 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.74□□□□□ -1.65
BRCA1P38398 AC105036.1-201ENST00000566222 271 ntBASIC4.74□□□□□ -1.65
BRCA1P38398 AC135507.2-201ENST00000612443 309 ntBASIC4.74□□□□□ -1.65
BRCA1P38398 AC079684.1-201ENST00000621405 437 ntBASIC4.74□□□□□ -1.65
BRCA1P38398 AC012078.1-201ENST00000405035 1646 ntBASIC4.74□□□□□ -1.65
BRCA1P38398 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.74□□□□□ -1.65
BRCA1P38398 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCA1P38398 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.73□□□□□ -1.65
BRCA1P38398 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
BRCA1P38398 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 HIGD1AP4-201ENST00000430194 280 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.73□□□□□ -1.65
BRCA1P38398 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.73□□□□□ -1.65
BRCA1P38398 AC112184.1-201ENST00000505179 312 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 AC026784.1-201ENST00000507986 352 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.73□□□□□ -1.65
BRCA1P38398 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCA1P38398 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.73□□□□□ -1.65
BRCA1P38398 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
BRCA1P38398 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCA1P38398 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCA1P38398 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRCA1P38398 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.73□□□□□ -1.65
BRCA1P38398 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 RPL21P10-201ENST00000463521 490 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.73□□□□□ -1.65
BRCA1P38398 PRELID3BP6-201ENST00000503839 571 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 AC026782.2-201ENST00000510845 636 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 RPL23AP87-202ENST00000573039 466 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 AL354760.1-201ENST00000608357 643 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 MTCO1P46-201ENST00000451639 1491 ntBASIC4.73□□□□□ -1.65
BRCA1P38398 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRCA1P38398 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.72□□□□□ -1.65
BRCA1P38398 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.72□□□□□ -1.65
BRCA1P38398 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
BRCA1P38398 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRCA1P38398 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
BRCA1P38398 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.72□□□□□ -1.65
BRCA1P38398 SNORD35B-201ENST00000363660 87 ntBASIC4.72□□□□□ -1.65
BRCA1P38398 Y_RNA.510-201ENST00000384511 114 ntBASIC4.72□□□□□ -1.65
BRCA1P38398 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.72□□□□□ -1.65
BRCA1P38398 RPL36AP10-201ENST00000421785 322 ntBASIC4.72□□□□□ -1.65
BRCA1P38398 RBMY1KP-201ENST00000423480 476 ntBASIC4.72□□□□□ -1.65
BRCA1P38398 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms