Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
HOXD13P35453 SNORA11C-201ENST00000408532 129 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXD13P35453 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXD13P35453 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXD13P35453 AC069213.2-201ENST00000420238 366 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXD13P35453 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXD13P35453 RPL7AP25-201ENST00000423357 805 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXD13P35453 YWHAEP5-201ENST00000431545 765 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 RPEP2-201ENST00000432149 701 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXD13P35453 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXD13P35453 GXYLT1P1-201ENST00000446657 490 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXD13P35453 RPS29P33-201ENST00000456717 146 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXD13P35453 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXD13P35453 AC090013.1-201ENST00000485147 480 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 RPL23AP72-201ENST00000492447 435 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 RPL30P11-201ENST00000495304 339 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 ARL4AP1-201ENST00000503220 705 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXD13P35453 AC112198.4-201ENST00000515450 351 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.94□□□□□ -1.62
HOXD13P35453 AP000827.1-201ENST00000527814 258 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXD13P35453 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXD13P35453 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.94□□□□□ -1.62
HOXD13P35453 OR4U1P-201ENST00000554958 912 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AC068831.4-201ENST00000556118 109 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AC090515.3-201ENST00000560431 315 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AC084783.1-201ENST00000565846 910 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.94□□□□□ -1.62
HOXD13P35453 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXD13P35453 AC068620.3-201ENST00000602749 560 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AP003117.1-201ENST00000602771 554 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AC008782.1-201ENST00000603386 430 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AC020634.1-201ENST00000608701 549 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AL121890.3-201ENST00000618494 516 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AL049536.1-201ENST00000625043 744 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HOXD13P35453 OR51H2P-202ENST00000641424 3046 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
HOXD13P35453 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HOXD13P35453 AL592437.2-201ENST00000421655 2434 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
HOXD13P35453 AC012618.3-205ENST00000637896 1496 ntBASIC4.94□□□□□ -1.62
HOXD13P35453 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.94□□□□□ -1.62
HOXD13P35453 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HOXD13P35453 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 AC120338.1-201ENST00000625074 1541 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 ASNSP1-204ENST00000641977 1664 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
HOXD13P35453 RNU1-20P-201ENST00000363314 162 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 SNORA71.2-201ENST00000364941 134 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 U6.112-201ENST00000384129 70 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 RNU6-207P-201ENST00000384137 107 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 MIR585-201ENST00000384887 94 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD13P35453 RPL22P22-201ENST00000395439 379 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 HNRNPDP2-201ENST00000406475 478 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD13P35453 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXD13P35453 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD13P35453 AC115285.1-201ENST00000424879 736 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 RPL7P4-203ENST00000430239 730 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 RPS26P40-201ENST00000435209 294 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD13P35453 AL357520.1-201ENST00000441557 453 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD13P35453 AC044797.1-201ENST00000445744 679 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.93□□□□□ -1.62
HOXD13P35453 HMGN1P5-201ENST00000448591 263 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 DNAJC19P8-201ENST00000452887 259 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 RN7SL817P-201ENST00000480777 288 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
HOXD13P35453 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 PGBD4P4-201ENST00000509673 613 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AP003102.1-201ENST00000525638 661 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AC124293.1-201ENST00000530034 493 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 CYCSP28-201ENST00000534284 321 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HOXD13P35453 ATP5J2P6-201ENST00000565203 266 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 MIR4789-201ENST00000577469 82 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 VN1R88P-201ENST00000596787 292 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.93□□□□□ -1.62
HOXD13P35453 AC091979.2-201ENST00000607514 214 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.93□□□□□ -1.62
HOXD13P35453 AC116651.1-201ENST00000609724 556 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 uc_338.18-201ENST00000615451 175 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AC018926.3-201ENST00000618841 406 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AC091905.2-201ENST00000623143 306 ntBASIC4.93□□□□□ -1.62
HOXD13P35453 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.93□□□□□ -1.62
HOXD13P35453 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms