Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RPS20P14-201ENST00000412545 360 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AL138785.1-201ENST00000425821 331 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC104837.2-201ENST00000427236 424 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC28A1O00337 ACTR3P2-201ENST00000439585 1257 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 UBE2V1P3-201ENST00000439651 417 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AL357520.1-201ENST00000441557 453 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AL162591.2-201ENST00000449634 317 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 HMGB3P21-201ENST00000452483 547 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AC010469.1-201ENST00000463864 576 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 RN7SL329P-201ENST00000467740 299 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 RPL23AP71-201ENST00000470966 469 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.26□□□□□ -1.73
SLC28A1O00337 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC28A1O00337 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC28A1O00337 UBTFL9-201ENST00000534504 1148 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC28A1O00337 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC104229.1-201ENST00000561364 255 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AC090751.1-201ENST00000566966 267 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 OR1F2P-201ENST00000570470 933 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC093765.1-201ENST00000603758 881 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 OR2BH1P-201ENST00000608850 864 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AL133243.1-201ENST00000614487 366 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC28A1O00337 U6.107-201ENST00000637108 79 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.26□□□□□ -1.73
SLC28A1O00337 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.26□□□□□ -1.73
SLC28A1O00337 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC28A1O00337 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC017007.4-201ENST00000503353 1352 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SLC28A1O00337 AC134882.1-201ENST00000603738 1676 ntBASIC4.26□□□□□ -1.73
SLC28A1O00337 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
SLC28A1O00337 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC28A1O00337 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SLC28A1O00337 MTATP6P31-201ENST00000406985 692 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 MIR1911-201ENST00000410783 80 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 RN7SKP106-201ENST00000410832 272 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC28A1O00337 HMGB3P31-201ENST00000413333 595 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC28A1O00337 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC28A1O00337 AL158050.1-201ENST00000416077 457 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 RPS23P10-201ENST00000416185 486 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 AL031736.2-201ENST00000426573 787 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 ETF1P3-201ENST00000430422 1160 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.25□□□□□ -1.73
SLC28A1O00337 PRELID3BP10-201ENST00000431957 584 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 AL512661.1-201ENST00000434586 1253 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC28A1O00337 AC069285.2-201ENST00000440210 275 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 FGF7P3-201ENST00000454645 303 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 CYCSP53-201ENST00000455540 265 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC28A1O00337 AC011037.1-201ENST00000483964 558 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 RN7SL812P-201ENST00000493791 279 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 AC008638.1-201ENST00000506035 866 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 SNORA26.10-201ENST00000516427 141 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 NPM1P6-201ENST00000521088 871 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.25□□□□□ -1.73
SLC28A1O00337 AP000827.1-201ENST00000527814 258 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 AC044860.2-201ENST00000561005 179 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 CYP4A43P-201ENST00000568156 121 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC28A1O00337 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC28A1O00337 AC012254.4-201ENST00000588843 273 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
SLC28A1O00337 AC211433.2-201ENST00000608433 387 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 RMST_10.1-201ENST00000616309 154 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.25□□□□□ -1.73
SLC28A1O00337 MIR6891-201ENST00000618788 93 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC28A1O00337 CDRT1-208ENST00000630868 794 ntBASIC4.25□□□□□ -1.73
SLC28A1O00337 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.25□□□□□ -1.73
SLC28A1O00337 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SLC28A1O00337 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.25□□□□□ -1.73
SLC28A1O00337 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SLC28A1O00337 AC008432.1-201ENST00000615912 1320 ntBASIC4.24□□□□□ -1.73
SLC28A1O00337 AC018529.3-201ENST00000624212 2254 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms