Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H2afb3S4R1G7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Mir1199-201ENSMUST00000117015 119 ntBASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Gm13168-201ENSMUST00000121771 632 ntBASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Gm10653-202ENSMUST00000139570 835 ntBASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Gm18958-201ENSMUST00000174258 762 ntBASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Il3ra-202ENSMUST00000223589 738 ntBASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Timm23-208ENSMUST00000226683 750 ntBASIC14.91□□□□□ -0.02
H2afb3S4R1G7 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.91□□□□□ -0.02
H2afb3S4R1G7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H2afb3S4R1G7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Gm27000-201ENSMUST00000182943 842 ntBASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H2afb3S4R1G7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Gm29257-201ENSMUST00000186115 639 ntBASIC14.89□□□□□ -0.03
H2afb3S4R1G7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms