Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.05■□□□□ -0
H2afb1S4R1E0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
H2afb1S4R1E0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.05■□□□□ -0
H2afb1S4R1E0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb1S4R1E0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.05■□□□□ -0
H2afb1S4R1E0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.05■□□□□ -0
H2afb1S4R1E0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb1S4R1E0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.05■□□□□ -0
H2afb1S4R1E0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.05■□□□□ -0
H2afb1S4R1E0 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.05■□□□□ -0
H2afb1S4R1E0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb1S4R1E0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb1S4R1E0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.05■□□□□ -0
H2afb1S4R1E0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.05■□□□□ -0
H2afb1S4R1E0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb1S4R1E0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
H2afb1S4R1E0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
H2afb1S4R1E0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
H2afb1S4R1E0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.04■□□□□ -0
H2afb1S4R1E0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
H2afb1S4R1E0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
H2afb1S4R1E0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
H2afb1S4R1E0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.04■□□□□ -0
H2afb1S4R1E0 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.04■□□□□ -0
H2afb1S4R1E0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
H2afb1S4R1E0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.03■□□□□ -0
H2afb1S4R1E0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.03■□□□□ -0
H2afb1S4R1E0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
H2afb1S4R1E0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.03■□□□□ -0
H2afb1S4R1E0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
H2afb1S4R1E0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.03■□□□□ -0
H2afb1S4R1E0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
H2afb1S4R1E0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.03■□□□□ -0
H2afb1S4R1E0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
H2afb1S4R1E0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.03■□□□□ -0
H2afb1S4R1E0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.02■□□□□ -0
H2afb1S4R1E0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
H2afb1S4R1E0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.02■□□□□ -0
H2afb1S4R1E0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.02■□□□□ -0
H2afb1S4R1E0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.02■□□□□ -0
H2afb1S4R1E0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
H2afb1S4R1E0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
H2afb1S4R1E0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.02■□□□□ -0
H2afb1S4R1E0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
H2afb1S4R1E0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms