Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Mrpl40Q9Z2Q5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.58■□□□□ 0.25
Mrpl40Q9Z2Q5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Mrpl40Q9Z2Q5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mrpl40Q9Z2Q5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mrpl40Q9Z2Q5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Mir1668-201ENSMUST00000184114 107 ntBASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Idnk-204ENSMUST00000226010 1898 ntBASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mrpl40Q9Z2Q5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mrpl40Q9Z2Q5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm17661-201ENSMUST00000170317 270 ntBASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Ank2-226ENSMUST00000189368 339 ntBASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mrpl40Q9Z2Q5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms