Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn3Q9Z0G9 Haglr-201ENSMUST00000100000 2085 ntBASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn3Q9Z0G9 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.77■□□□□ 0.27
Cldn3Q9Z0G9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cldn3Q9Z0G9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.77■□□□□ 0.27
Cldn3Q9Z0G9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cldn3Q9Z0G9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.77■□□□□ 0.27
Cldn3Q9Z0G9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cldn3Q9Z0G9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cldn3Q9Z0G9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cldn3Q9Z0G9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn3Q9Z0G9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Gm13836-201ENSMUST00000121159 501 ntBASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn3Q9Z0G9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms