Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cr1Q9Z0D9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cx3cr1Q9Z0D9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cx3cr1Q9Z0D9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Cx3cr1Q9Z0D9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cx3cr1Q9Z0D9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cr1Q9Z0D9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Dio3-201ENSMUST00000097228 1449 ntBASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cr1Q9Z0D9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cx3cr1Q9Z0D9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms