Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd2Q9R1A8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Gm20760-201ENSMUST00000179197 648 ntBASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Gm10698-201ENSMUST00000182663 604 ntBASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Gm43183-201ENSMUST00000200632 547 ntBASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfwd2Q9R1A8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Gm12382-201ENSMUST00000122005 922 ntBASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfwd2Q9R1A8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfwd2Q9R1A8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Rfwd2Q9R1A8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.08■□□□□ 0.33
Rfwd2Q9R1A8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rfwd2Q9R1A8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfwd2Q9R1A8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Gm15378-201ENSMUST00000121894 207 ntBASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfwd2Q9R1A8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfwd2Q9R1A8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms