Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh17Q9R100 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.16■□□□□ 0.18
Cdh17Q9R100 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.16■□□□□ 0.18
Cdh17Q9R100 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Gm27463-201ENSMUST00000183569 57 ntBASIC16.16■□□□□ 0.18
Cdh17Q9R100 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdh17Q9R100 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.16■□□□□ 0.18
Cdh17Q9R100 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdh17Q9R100 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdh17Q9R100 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Cdh17Q9R100 Actl10-202ENSMUST00000226583 1501 ntBASIC16.14■□□□□ 0.18
Cdh17Q9R100 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.14■□□□□ 0.17
Cdh17Q9R100 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh17Q9R100 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms