Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Six6Q9QZ28 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.13□□□□□ -0.15
Six6Q9QZ28 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Six6Q9QZ28 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Six6Q9QZ28 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.12□□□□□ -0.15
Six6Q9QZ28 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Six6Q9QZ28 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.11□□□□□ -0.15
Six6Q9QZ28 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.11□□□□□ -0.15
Six6Q9QZ28 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms