Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfx5Q9JL61 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Olfr129-201ENSMUST00000122318 993 ntBASIC17.5■□□□□ 0.39
Rfx5Q9JL61 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfx5Q9JL61 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfx5Q9JL61 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rfx5Q9JL61 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Gm27742-201ENSMUST00000184667 60 ntBASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfx5Q9JL61 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Gm36967-201ENSMUST00000193814 266 ntBASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms