Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scn5aQ9JJV9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn5aQ9JJV9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn5aQ9JJV9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn5aQ9JJV9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scn5aQ9JJV9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scn5aQ9JJV9 Gm6089-201ENSMUST00000197666 938 ntBASIC17.08■□□□□ 0.33
Scn5aQ9JJV9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scn5aQ9JJV9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 Gm25406-201ENSMUST00000157599 105 ntBASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scn5aQ9JJV9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scn5aQ9JJV9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Gm8969-201ENSMUST00000199694 526 ntBASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn5aQ9JJV9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Gm11780-201ENSMUST00000136880 516 ntBASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Gm9727-201ENSMUST00000161387 555 ntBASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.05■□□□□ 0.32
Scn5aQ9JJV9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Gm25911-201ENSMUST00000157621 56 ntBASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 AV026068-213ENSMUST00000223675 1171 ntBASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn5aQ9JJV9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms