Protein–RNA interactions for Protein: Q9JJH7

Trpm5, Transient receptor potential cation channel subfamily M member 5, mousemouse

Predictions only

Length 1,158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm5Q9JJH7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trpm5Q9JJH7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trpm5Q9JJH7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trpm5Q9JJH7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trpm5Q9JJH7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Gm1401-201ENSMUST00000122048 772 ntBASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.01■□□□□ 0.47
Trpm5Q9JJH7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Mir5131-201ENSMUST00000175426 93 ntBASIC18■□□□□ 0.47
Trpm5Q9JJH7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 AC132104.2-201ENSMUST00000215011 266 ntBASIC18■□□□□ 0.47
Trpm5Q9JJH7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Gfra2-202ENSMUST00000227633 1480 ntBASIC18■□□□□ 0.47
Trpm5Q9JJH7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trpm5Q9JJH7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Gm44430-201ENSMUST00000203376 995 ntBASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trpm5Q9JJH7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm5Q9JJH7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm5Q9JJH7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trpm5Q9JJH7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm5Q9JJH7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.98■□□□□ 0.47
Trpm5Q9JJH7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm5Q9JJH7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trpm5Q9JJH7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms