Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Mir5130-201ENSMUST00000175160 84 ntBASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Gm45058-201ENSMUST00000205810 766 ntBASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tubb3Q9ERD7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Gm7638-201ENSMUST00000121348 967 ntBASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tubb3Q9ERD7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tubb3Q9ERD7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tubb3Q9ERD7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tubb3Q9ERD7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Tubb3Q9ERD7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Gm7791-201ENSMUST00000219066 539 ntBASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tubb3Q9ERD7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Gm10013-201ENSMUST00000106074 672 ntBASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Gm6659-201ENSMUST00000174752 547 ntBASIC16.44■□□□□ 0.22
Tubb3Q9ERD7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms