Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tlr9Q9EQU3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Gm6659-201ENSMUST00000174752 547 ntBASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tlr9Q9EQU3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tlr9Q9EQU3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.41■□□□□ 0.38
Tlr9Q9EQU3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Gm27463-201ENSMUST00000183569 57 ntBASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tlr9Q9EQU3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Tlr9Q9EQU3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Tlr9Q9EQU3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Tlr9Q9EQU3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Tlr9Q9EQU3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr9Q9EQU3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr9Q9EQU3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr9Q9EQU3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr9Q9EQU3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tlr9Q9EQU3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tlr9Q9EQU3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.39■□□□□ 0.37
Tlr9Q9EQU3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.39■□□□□ 0.37
Tlr9Q9EQU3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms