Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 H2af-ps-201ENSMUST00000119066 295 ntBASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Gm12497-201ENSMUST00000138778 237 ntBASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nkx2-4Q9EQM3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Gm7222-201ENSMUST00000117512 906 ntBASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.99■□□□□ 0.31
Nkx2-4Q9EQM3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Chchd1-203ENSMUST00000224633 557 ntBASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nkx2-4Q9EQM3 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nkx2-4Q9EQM3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Nkx2-4Q9EQM3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms