Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Gm2399-201ENSMUST00000104944 225 ntBASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Zfp783-201ENSMUST00000095946 670 ntBASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Ap3s1Q9DCR2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ap3s1Q9DCR2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ap3s1Q9DCR2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.83□□□□□ -0.03
Ap3s1Q9DCR2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ap3s1Q9DCR2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ap3s1Q9DCR2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Gm11643-201ENSMUST00000119578 864 ntBASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ap3s1Q9DCR2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Gm42778-201ENSMUST00000199644 553 ntBASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ap3s1Q9DCR2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ap3s1Q9DCR2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms