Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Rarb-207ENSMUST00000225921 2756 ntBASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Mir5131-201ENSMUST00000175426 93 ntBASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Gm27525-201ENSMUST00000184465 107 ntBASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Gm37935-201ENSMUST00000192012 982 ntBASIC16.21■□□□□ 0.19
Rrp8Q9DB85 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.21■□□□□ 0.19
Rrp8Q9DB85 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rrp8Q9DB85 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Rrp8Q9DB85 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.21■□□□□ 0.18
Rrp8Q9DB85 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rrp8Q9DB85 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.2■□□□□ 0.18
Rrp8Q9DB85 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rrp8Q9DB85 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rrp8Q9DB85 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Gm1401-201ENSMUST00000122048 772 ntBASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Gm25925-201ENSMUST00000158314 306 ntBASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Gm10060-201ENSMUST00000212002 111 ntBASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rrp8Q9DB85 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms