Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4cQ9D7F7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Gm9731-201ENSMUST00000209480 747 ntBASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Gm7791-201ENSMUST00000219066 539 ntBASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Chmp4cQ9D7F7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Gm22240-201ENSMUST00000175225 82 ntBASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4cQ9D7F7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.83■□□□□ 0.76
Chmp4cQ9D7F7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4cQ9D7F7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Gm10812-201ENSMUST00000099864 546 ntBASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Chmp4cQ9D7F7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.8■□□□□ 0.76
Chmp4cQ9D7F7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms