Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.19■□□□□ 0.5
Cfap53Q9D439 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap53Q9D439 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.19■□□□□ 0.5
Cfap53Q9D439 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.18■□□□□ 0.5
Cfap53Q9D439 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Haglr-201ENSMUST00000100000 2085 ntBASIC18.18■□□□□ 0.5
Cfap53Q9D439 Gm13216-201ENSMUST00000117145 591 ntBASIC18.18■□□□□ 0.5
Cfap53Q9D439 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Mir5130-201ENSMUST00000175160 84 ntBASIC18.18■□□□□ 0.5
Cfap53Q9D439 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.18■□□□□ 0.5
Cfap53Q9D439 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.18■□□□□ 0.5
Cfap53Q9D439 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cfap53Q9D439 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.18■□□□□ 0.5
Cfap53Q9D439 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.17■□□□□ 0.5
Cfap53Q9D439 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.17■□□□□ 0.5
Cfap53Q9D439 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Gm7213-201ENSMUST00000215977 950 ntBASIC18.17■□□□□ 0.5
Cfap53Q9D439 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cfap53Q9D439 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cfap53Q9D439 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap53Q9D439 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cfap53Q9D439 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Gm45058-201ENSMUST00000205810 766 ntBASIC18.15■□□□□ 0.5
Cfap53Q9D439 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cfap53Q9D439 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms