Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx29Q9D3S3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Snx29Q9D3S3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Gm4535-201ENSMUST00000182274 558 ntBASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.18■□□□□ 0.5
Snx29Q9D3S3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Gm10355-201ENSMUST00000097146 517 ntBASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.18■□□□□ 0.5
Snx29Q9D3S3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Gm7506-201ENSMUST00000207758 815 ntBASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Snx29Q9D3S3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Mir5126-201ENSMUST00000175513 77 ntBASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Gm36967-201ENSMUST00000193814 266 ntBASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Snx29Q9D3S3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Gm25990-201ENSMUST00000102440 86 ntBASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Snx29Q9D3S3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Snx29Q9D3S3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Snx29Q9D3S3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms