Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Mir7071-201ENSMUST00000184847 69 ntBASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Phf7-203ENSMUST00000226565 1971 ntBASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
5530400C23RikQ9D3I0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Gm13186-201ENSMUST00000118031 316 ntBASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
5530400C23RikQ9D3I0 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
5530400C23RikQ9D3I0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
5530400C23RikQ9D3I0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
5530400C23RikQ9D3I0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
5530400C23RikQ9D3I0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
5530400C23RikQ9D3I0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
5530400C23RikQ9D3I0 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.27■□□□□ 0.19
5530400C23RikQ9D3I0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
5530400C23RikQ9D3I0 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.27■□□□□ 0.19
5530400C23RikQ9D3I0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Mir1668-201ENSMUST00000184114 107 ntBASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
5530400C23RikQ9D3I0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms