Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp48Q9D361 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Gm22697-201ENSMUST00000175194 63 ntBASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Snrnp48Q9D361 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Gm21559-201ENSMUST00000220638 855 ntBASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Gm8587-201ENSMUST00000076538 843 ntBASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.54■□□□□ 0.24
Snrnp48Q9D361 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Gm10013-201ENSMUST00000106074 672 ntBASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Gm11336-201ENSMUST00000118168 334 ntBASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Gm10231-201ENSMUST00000181584 441 ntBASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Gm29707-201ENSMUST00000196325 491 ntBASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Gm10175-202ENSMUST00000208752 441 ntBASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Snrnp48Q9D361 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Snrnp48Q9D361 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms