Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Upk1aQ9D132 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Upk1aQ9D132 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Upk1aQ9D132 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Upk1aQ9D132 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Gm12527-201ENSMUST00000117967 564 ntBASIC15.74■□□□□ 0.11
Upk1aQ9D132 Gm37025-201ENSMUST00000195159 829 ntBASIC15.74■□□□□ 0.11
Upk1aQ9D132 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.74■□□□□ 0.11
Upk1aQ9D132 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.74■□□□□ 0.11
Upk1aQ9D132 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk1aQ9D132 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.73■□□□□ 0.11
Upk1aQ9D132 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Gm12382-201ENSMUST00000122005 922 ntBASIC15.73■□□□□ 0.11
Upk1aQ9D132 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Upk1aQ9D132 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.73■□□□□ 0.11
Upk1aQ9D132 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.73■□□□□ 0.11
Upk1aQ9D132 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Gm37856-201ENSMUST00000191634 999 ntBASIC15.73■□□□□ 0.11
Upk1aQ9D132 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.73■□□□□ 0.11
Upk1aQ9D132 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Upk1aQ9D132 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Gm18666-201ENSMUST00000190039 958 ntBASIC15.72■□□□□ 0.11
Upk1aQ9D132 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Upk1aQ9D132 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.71■□□□□ 0.11
Upk1aQ9D132 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Gm43183-201ENSMUST00000200632 547 ntBASIC15.71■□□□□ 0.11
Upk1aQ9D132 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Upk1aQ9D132 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Upk1aQ9D132 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.71■□□□□ 0.1
Upk1aQ9D132 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Upk1aQ9D132 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Upk1aQ9D132 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms