Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Gm10138-203ENSMUST00000206952 366 ntBASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Mrpl55Q9CZ83 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Mrpl55Q9CZ83 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Mrpl55Q9CZ83 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Mrpl55Q9CZ83 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Mrpl55Q9CZ83 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Mrpl55Q9CZ83 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Mrpl55Q9CZ83 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Mrpl55Q9CZ83 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Mrpl55Q9CZ83 Gm18688-201ENSMUST00000204695 1859 ntBASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Gm10698-201ENSMUST00000182663 604 ntBASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 AC153881.1-201ENSMUST00000214448 284 ntBASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mrpl55Q9CZ83 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Mrpl55Q9CZ83 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Mrpl55Q9CZ83 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mrpl55Q9CZ83 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mrpl55Q9CZ83 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms