Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.62■□□□□ 0.89
Nip7Q9CXK8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nip7Q9CXK8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Gm43073-201ENSMUST00000198200 1189 ntBASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.61■□□□□ 0.89
Nip7Q9CXK8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Mir5126-201ENSMUST00000175513 77 ntBASIC20.6■□□□□ 0.89
Nip7Q9CXK8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Gm5364-201ENSMUST00000216789 889 ntBASIC20.6■□□□□ 0.89
Nip7Q9CXK8 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nip7Q9CXK8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Gm13418-201ENSMUST00000119097 944 ntBASIC20.59■□□□□ 0.89
Nip7Q9CXK8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nip7Q9CXK8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nip7Q9CXK8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nip7Q9CXK8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC20.58■□□□□ 0.89
Nip7Q9CXK8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Nip7Q9CXK8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nip7Q9CXK8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Nip7Q9CXK8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nip7Q9CXK8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nip7Q9CXK8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nip7Q9CXK8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nip7Q9CXK8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Gm25990-201ENSMUST00000102440 86 ntBASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Gm4535-201ENSMUST00000182274 558 ntBASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Gm8000-201ENSMUST00000188378 592 ntBASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nip7Q9CXK8 Gm10355-201ENSMUST00000097146 517 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms