Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Timm23-208ENSMUST00000226683 750 ntBASIC19.52■□□□□ 0.72
Smc3Q9CW03 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc3Q9CW03 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc3Q9CW03 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc3Q9CW03 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Smc3Q9CW03 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.51■□□□□ 0.71
Smc3Q9CW03 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.51■□□□□ 0.71
Smc3Q9CW03 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smc3Q9CW03 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.5■□□□□ 0.71
Smc3Q9CW03 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smc3Q9CW03 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.5■□□□□ 0.71
Smc3Q9CW03 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc3Q9CW03 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smc3Q9CW03 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.49■□□□□ 0.71
Smc3Q9CW03 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.49■□□□□ 0.71
Smc3Q9CW03 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.49■□□□□ 0.71
Smc3Q9CW03 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.49■□□□□ 0.71
Smc3Q9CW03 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Smc3Q9CW03 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc3Q9CW03 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.48■□□□□ 0.71
Smc3Q9CW03 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Smc3Q9CW03 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms