Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Gm4459-201ENSMUST00000118750 468 ntBASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Gm12497-201ENSMUST00000138778 237 ntBASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldnd1Q9CQX5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Gm11780-201ENSMUST00000136880 516 ntBASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldnd1Q9CQX5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cldnd1Q9CQX5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cldnd1Q9CQX5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cldnd1Q9CQX5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cldnd1Q9CQX5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.96■□□□□ 0.3
Cldnd1Q9CQX5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldnd1Q9CQX5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Gm7222-201ENSMUST00000117512 906 ntBASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Gm25911-201ENSMUST00000157621 56 ntBASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cldnd1Q9CQX5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldnd1Q9CQX5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms