Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Mir8098-201ENSMUST00000184011 137 ntBASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Sec61bQ9CQS8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Sec61bQ9CQS8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Gm38342-201ENSMUST00000195710 2980 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Gm10052-201ENSMUST00000168019 960 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Gm29707-201ENSMUST00000196325 491 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Gm43347-201ENSMUST00000200226 580 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Gm44771-201ENSMUST00000206975 626 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Gm18195-201ENSMUST00000207604 706 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 AC125350.1-201ENSMUST00000225115 903 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Gm7729-201ENSMUST00000050143 801 ntBASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Sec61bQ9CQS8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 AC153889.1-201ENSMUST00000219257 330 ntBASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Birc2-201ENSMUST00000054878 378 ntBASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Sec61bQ9CQS8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms