Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39lQ9CQD0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Gm45102-201ENSMUST00000207427 857 ntBASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Rps24-207ENSMUST00000224568 714 ntBASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rpl39lQ9CQD0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Gm9988-201ENSMUST00000069786 435 ntBASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rpl39lQ9CQD0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39lQ9CQD0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms