Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.42■□□□□ 0.86
Trim34aQ99PP6 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Gm5867-201ENSMUST00000063197 592 ntBASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim34aQ99PP6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.41■□□□□ 0.86
Trim34aQ99PP6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trim34aQ99PP6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim34aQ99PP6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim34aQ99PP6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.39■□□□□ 0.86
Trim34aQ99PP6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trim34aQ99PP6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim34aQ99PP6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Mir5131-201ENSMUST00000175426 93 ntBASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim34aQ99PP6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Gm25745-201ENSMUST00000174945 133 ntBASIC20.38■□□□□ 0.85
Trim34aQ99PP6 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trim34aQ99PP6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim34aQ99PP6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34aQ99PP6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34aQ99PP6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34aQ99PP6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34aQ99PP6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim34aQ99PP6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim34aQ99PP6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms