Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.29■□□□□ 0.2
Trim8Q99PJ2 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim8Q99PJ2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim8Q99PJ2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Trmt13-210ENSMUST00000198454 880 ntBASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim8Q99PJ2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim8Q99PJ2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim8Q99PJ2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim8Q99PJ2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim8Q99PJ2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Gm22240-201ENSMUST00000175225 82 ntBASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim8Q99PJ2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim8Q99PJ2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms